University of Michigan Workshops 2025
Intro to Reproducibility
Workshop Material
Activity
Intermediate & Advanced Reproducibility
Workshop Material
Activity
Analyzing Clinical Data
Workshop Material
Activity
Choosing Genomics Tools
Workshop Material
Activity
Spatial Transcriptomics
Workshop Material
Activity
UM Resources
Contact Us
ITN Resources
Intermediate & Advanced Reproducibility
Workshop Material
In this workshop we will cover:
Fundamentals of version control
How to use GitHub to not only make code open source, but also version controlled
Best practices for collaborative code review
Best practices for using containers
Slides Link
Discussion Link
Install Docker Desktop
Additional Resources
ITN Course “Advanced Reproducibility in Cancer Informatics”
ITN Course “GitHub Automation for Scientists”
ITN Course “Containers for Scientists”