YouTube Videos

AnVIL

Check out the AnVIL YouTube channel: https://www.youtube.com/@anvilprojectorg

AnVIL “Shorts” (AnVIL in 2 minutes)

Video	Google Slides
Sharing on AnVIL	Go to slides
AnVIL for Analysts	Go to slides
Sequence Read Archive (SRA) data on AnVIL	Go to slides
AnVIL for Data Submitters	Go to slides
Discover tools & pipelines on AnVIL	Go to slides
Reproducibility on AnVIL	Go to slides
Scalability on AnVIL	Go to slides
AnVIL Champions	Go to slides
AnVIL for Instructors	Go to slides
NIH Data Management and Sharing on AnVIL	Go to slides
Standardization on AnVIL	Go to slides
Sharing on AnVIL for Instructors	Go to slides
Migrate your tools & pipelines on AnVIL	Go to slides
AnVIL for Lead Investigators	Go to slides
Share tools & pipelines on AnVIL	Go to slides

AnVIL Getting Started

Video	Google Slides
Why AnVIL?	Go to slides
Starting Jupyter on the AnVIL Platform	Go to slides
Starting RStudio on the AnVIL Platform	Go to slides
Starting Galaxy on the AnVIL Platform	Go to slides
Welcome to AnVIL! Portal homepage tour edition! #anvilproject #bioinformatics #cloudcomputing	N/A
Welcome to AnVIL! Getting Help edition! #anvilproject #bioinformatics #cloudcomputing	N/A

AnVIL Monthly Demos

Video	Google Slides
AnVIL Demos: Introduction to AnVIL - 2023/03/23	N/A
AnVIL Demos: Using the Human Pangenome on AnVIL - 2023/04/27	N/A
AnVIL Demos: WARP Pipelines in AnVIL/Terra - 2023/05/18	N/A
AnVIL Demos: How to combine data across workspaces - 06/22/2023	N/A
AnVIL Demos: Interactive Genomic Data Science with Bioconductor - 07/20/2023	N/A
AnVIL Demos: Running Galaxy in AnVIL - 08/31/2023	Go to slides
AnVIL Demos: Epigenetics in AnVIL - 2023/09/21	Go to slides
AnVIL Demos: DUOS - a tour of AnVIL’s innovative data sharing platform - 2023/10/26	N/A
AnVIL Demos: Collecting and subsetting SRA data - 2023/12/14	N/A
AnVIL Demos: Single Cell with Bioconductor - 2024/05/23	N/A
AnVIL Demos: QC Analysis Pipeline from CCDG on AnVIL - 2024/06/20	N/A
AnVIL Demos: Sharing Data in the AnVIL	N/A
AnVIL Demos: Getting Started with your Analysis in AnVIL and Running FastQC with Galaxy in AnVIL	N/A
AnVIL Demos: Variant Analysis with the VRS Toolkit in AnVIL	N/A
AnVIL Demos: Galaxy Learning and Modeling (GLEAM): Machine Learning accessible and best practices	N/A
AnVIL Demos: The All of Us and AnVIL Imputation Service	N/A

AnVIL WDL

Video	Google Slides
WDL Workflow Basics	Go to slides
Run Workflow	Go to slides

GDSCN

Check out the GDSCN YouTube channel: https://www.youtube.com/@genomicdatasciencecommunit2514

SARS with Galaxy on AnVIL

Video	Google Slides
Introduction to SARS-CoV-2 Variant Detection	Go to slides
What is a variant?	Go to slides
The sequencing revolution	Go to slides
Alignments & data structure	Go to slides
Cloud computing	Go to slides
AnVIL laboratory introduction	Go to slides

BioDIGS Soil Project Protocols

Video	Google Slides
GDSCN Soil Sampling - Composite Sample Homogenization	N/A
GDSCN Soil Sampling - Preparing DNA Sample	N/A
GDSCN Soil Sampling - Preparing Heavy Metal Testing Sample	N/A