About the Authors
These credits are based on our course contributors table guidelines.
| Credits | Names |
|---|---|
| Pedagogy | |
| Lead Content Instructor | Elizabeth Humphries (Introduction, Writing Code, Understanding Unfamiliar Code, Cloud Computing) |
| Content Authors | Candace Savonen (Annotating Your Code), Carrie Wright (Introduction, Ethics of Using AI), Ava Hoffman (Refactoring Code, AI for Bioinformatics, Programming Languages) |
| Content Editor Reviewer | Howard Baek |
| Technical | |
| Template Publishing Engineers | Candace Savonen, Carrie Wright, Ava Hoffman |
| Publishing Maintenance Engineer | Candace Savonen |
| Technical Publishing Stylists | Carrie Wright, Ava Hoffman, Candace Savonen |
| Package Developers (ottrpal) | Candace Savonen, John Muschelli, Carrie Wright |
| Art and Design | |
| Figure Artists | Candace Savonen, Carrie Wright, Ava Hoffman, Elizabeth Humphries |
| Funding | |
| Funders | CS, CW, and HB were supported by the National Cancer Institute (NCI) under Grant UE5CA254170. AMH and EMH were supported by the AnVIL Project through cooperative agreement awards from the National Human Genome Research Institute with cofunding from OD/ODSS to the Broad Institute (U24HG010262) and Johns Hopkins University (U24HG010263). |
| Funding Staff | Sandra Ormbrek, Shasta Nicholson |
Tools Used:
## ─ Session info ───────────────────────────────────────────────────────────────
## setting value
## version R version 4.3.2 (2023-10-31)
## os Ubuntu 22.04.4 LTS
## system x86_64, linux-gnu
## ui X11
## language (EN)
## collate en_US.UTF-8
## ctype en_US.UTF-8
## tz Etc/UTC
## date 2024-09-04
## pandoc 3.1.1 @ /usr/local/bin/ (via rmarkdown)
##
## ─ Packages ───────────────────────────────────────────────────────────────────
## package * version date (UTC) lib source
## bookdown 0.39.1 2024-06-11 [1] Github (rstudio/bookdown@f244cf1)
## bslib 0.6.1 2023-11-28 [1] RSPM (R 4.3.0)
## cachem 1.0.8 2023-05-01 [1] RSPM (R 4.3.0)
## cli 3.6.2 2023-12-11 [1] RSPM (R 4.3.0)
## devtools 2.4.5 2022-10-11 [1] RSPM (R 4.3.0)
## digest 0.6.34 2024-01-11 [1] RSPM (R 4.3.0)
## ellipsis 0.3.2 2021-04-29 [1] RSPM (R 4.3.0)
## evaluate 0.23 2023-11-01 [1] RSPM (R 4.3.0)
## fastmap 1.1.1 2023-02-24 [1] RSPM (R 4.3.0)
## fs 1.6.3 2023-07-20 [1] RSPM (R 4.3.0)
## glue 1.7.0 2024-01-09 [1] RSPM (R 4.3.0)
## htmltools 0.5.7 2023-11-03 [1] RSPM (R 4.3.0)
## htmlwidgets 1.6.4 2023-12-06 [1] RSPM (R 4.3.0)
## httpuv 1.6.14 2024-01-26 [1] RSPM (R 4.3.0)
## jquerylib 0.1.4 2021-04-26 [1] RSPM (R 4.3.0)
## jsonlite 1.8.8 2023-12-04 [1] RSPM (R 4.3.0)
## knitr 1.47.3 2024-06-11 [1] Github (yihui/knitr@e1edd34)
## later 1.3.2 2023-12-06 [1] RSPM (R 4.3.0)
## lifecycle 1.0.4 2023-11-07 [1] RSPM (R 4.3.0)
## magrittr 2.0.3 2022-03-30 [1] RSPM (R 4.3.0)
## memoise 2.0.1 2021-11-26 [1] RSPM (R 4.3.0)
## mime 0.12 2021-09-28 [1] RSPM (R 4.3.0)
## miniUI 0.1.1.1 2018-05-18 [1] RSPM (R 4.3.0)
## pkgbuild 1.4.3 2023-12-10 [1] RSPM (R 4.3.0)
## pkgload 1.3.4 2024-01-16 [1] RSPM (R 4.3.0)
## profvis 0.3.8 2023-05-02 [1] RSPM (R 4.3.0)
## promises 1.2.1 2023-08-10 [1] RSPM (R 4.3.0)
## purrr 1.0.2 2023-08-10 [1] RSPM (R 4.3.0)
## R6 2.5.1 2021-08-19 [1] RSPM (R 4.3.0)
## Rcpp 1.0.12 2024-01-09 [1] RSPM (R 4.3.0)
## remotes 2.4.2.1 2023-07-18 [1] RSPM (R 4.3.0)
## rlang 1.1.4 2024-06-04 [1] CRAN (R 4.3.2)
## rmarkdown 2.27.1 2024-06-11 [1] Github (rstudio/rmarkdown@e1c93a9)
## sass 0.4.8 2023-12-06 [1] RSPM (R 4.3.0)
## sessioninfo 1.2.2 2021-12-06 [1] RSPM (R 4.3.0)
## shiny 1.8.0 2023-11-17 [1] RSPM (R 4.3.0)
## stringi 1.8.3 2023-12-11 [1] RSPM (R 4.3.0)
## stringr 1.5.1 2023-11-14 [1] RSPM (R 4.3.0)
## urlchecker 1.0.1 2021-11-30 [1] RSPM (R 4.3.0)
## usethis 2.2.3 2024-02-19 [1] RSPM (R 4.3.0)
## vctrs 0.6.5 2023-12-01 [1] RSPM (R 4.3.0)
## xfun 0.44.4 2024-06-11 [1] Github (yihui/xfun@9da62cc)
## xtable 1.8-4 2019-04-21 [1] RSPM (R 4.3.0)
## yaml 2.3.8 2023-12-11 [1] RSPM (R 4.3.0)
##
## [1] /usr/local/lib/R/site-library
## [2] /usr/local/lib/R/library
##
## ──────────────────────────────────────────────────────────────────────────────