Chapter2 Temporary Stub

Data Tables provide a way to organize data and metadata, including URI links to storage buckets. These tables are a convenient way to organize input for analyses as well as tracking workflow outputs.

Image shows a schematic of the data storage locations in an AnVIL Workspace. The Data Table is highlighted with a number 'three'.

The starting point for bringing your own data to AnVIL is the Workspace Dashboard. At the bottom right, you’ll find the full path to the Google Bucket information corresponding to your Workspace. You can click the clipboard icon on the right to copy the name of your Workspace Bucket. You will be able to see any uploaded files by clicking the “Open in browser” link.

Image shows a screenshot of the Workspace Dashboard. Google Bucket information, including the Google Bucket name, location, and 'Open in browser' link, at the bottom right of the screen is highlighted.

You can also see any uploaded files by clicking the “Files” directory at the bottom left in the Data Tab.

Image shows a screenshot of the Workspace Data tab. The Files directory and link on the bottom left is highlighted.

2.1 Browser: Upload Single Files

Click the “Files” directory at the bottom left of the Data Tab. Then click the “+” button in the bottom right corner of the screen. This will prompt a file browser on your local machine.

Image shows a screenshot of the Workspace Data tab. The plus button on the bottom right corner of the screen is highlighted.

2.2 Browser: Upload Folders

Click the “Open in browser” link on the bottom right of the Workspace Dashboard Tab. This will open a new browser window or tab directed to your Workspace’s Google Bucket on the Google Cloud Platform.

Image shows a screenshot of the Workspace Dashboard. The 'Open in browser' link at the bottom right of the screen is highlighted.

Here, you can upload files and manage your data and folders. You can also upload an entire folder by clicking on “UPLOAD FOLDER”.

Image shows a screenshot of the Workspace Google Bucket on the Google Cloud Platform. The 'UPLOAD FOLDER' button is highlighted.